Download Genomic Aln v4

Nucleotide sequences in fasta format for five Human Immunodeficiency Virus type-1 clinical
isolates. Highlighted regions indicate the nucleotide sequence encoding for the Protease,
Reverse Transcriptase & Integrase enzymes.
>MX-HIV-0086_complete_pol_region (GenBank Accession Number JN157829)
AGAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAGGAGATAACAACTCCCTCTCAGAAACAGGAgGaGCtatAtCCTCTAACctcCCTCAAATCACTCTTTGGC
AGCGACCCCTCGTCACAGTAAAGATAGGAGGGCAACTAAAGGAAGCTCTGTTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAATTTACCAGGAAGATGGAAACC
AAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGGCAGTATGATCAGGTACCCATAGAAATCTGCGGACATAAAACTGTAGGTACAGTATTAATAGGACCTACACCT
GTCAACATAATTGGAAGAAATCTATTGACTCAAATTGGCTGTACTTTAAATTTTCCCATTAGTCCTATTGARACTGTACCAGTAAAATTAAAGCCAGGAATGGATGGCCCAA
AAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAACTGGAAAAGGAAGGAAAAATTTCAAAGATTGGGCCTGAAAACCCATACAA
TACTCCAGTATTTGCCATAAAGAAAAAGGATAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAAAGAACTCAAGACTTCTGGGAAGTTCAATTAGGGATA
CCACATCCTGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAAGGCTTCAGGAAGTATACTGCATTTACCA
TACCTAGTATAAACAATGAGACACCGGGGATCAGATATCAGTACAATGTGCTTCCACAAGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGCATGACAAAAATCTTAGA
GCCTTTTAGGAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAAAAATAGAGGAACTAAGA
CAACATCTGTTGAGGTGGGGATTTGACACACCAGACAAAAAGCATCAAAAAGAACCTCCATTCCTTTGGATGGGGTATGAACTCCATCCTGAAAAATGGaCAGTACAGCCTA
TAGAACTGCCAGAAAAGGATAGCTGGACTGTCAATGACATACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAgATTTATGCAGGGATTCaaGTAAAGCAATTATGTAA
ACTCCTTAGGGGAACCAAAGCACTAACAGAAGTGATACCaCTAaCAGCAGAAGCAGAGCTAGAACTGGCAGAAAACAGGGAGATTCTAAAAGAACCAGTACATGGAGTGTAT
TATGACCCCTCAAAAGACTTAATAGCAGAAATACAGAAGCAGGGACATGGCCAATGGACCTATCAAATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAGTATTCAA
GAATAAGGGGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAATATCCATAGAAGCCATAGTCATATGGGGAAAGGTCCCTAAATTTAGATTACCCAT
ACAAAAAGAAACATGGGAAACATGGTGGACAGAGTATTGGCAGGCCACCTGGGTTCCTGAGTGGGAATTTGTCAATACCCCTCCTTTAGTAAAATTATGGTATCAGCTAGAA
AAAGAACCCATAGTGGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAATAGGGAAACTAAACTAGGAAAAGCAGGATATGTTACAGACAGAGGAAGACAAAAAGTTGTCC
CCCTAACGGACACAACAAATCAGAAGACTGAATTACAAGCAATTTATCTAGCTTTGCAGGATTCAGGATTAGAAGTAAACATAGTAACAGATTCACAATATGCATTAGGAAT
CCTTCAGGCACAACCGGATAAAAGTGAATCAGAAATGGTCAATCAAATAATAGAGCAGTTAATAAAAAAGGAAAAGATCTACCTGGCATGGGTACCAGCACACAAAGGAATT
GGagGAAATGAACAAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAGTACTAtTtTTAGATGGAATAgATAaGGcTCAagAtGAACATGAAAAATATCACAGTAATTGGA
GAGCGATGGCTAGTGATTTTAACCTGCCACCTATAGTAGCAAAAGAAATAGTGGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAG
TCCAGGAATATGGCAGCTAGATTGTACACACTTAGAAGGAAAAGTTATTCTAGTAGCAGTTCATGTGGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGG
CCAGAAACAGCATACTTCCTCTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGGTGGCAATTTCATCAGTAATGCAGTTAAGGCCGCCTGTTGGT
GGGCAGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTGGAATCTATAAATAAAGAATTAAAGAAAATTATAGGACAAGTAAAAGATCAGGC
TGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACA
GACATACAAACTAAAGAATTACAAAACCAAATTACAAAAATTTCAAAATTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGA
AAGGTGAAGGGGCAGTAGTGATACAAGATAATAGTGAAATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGT
GGCAAGTAGACAGGATGAGGATTAG >MX-HIV-0327_complete_pol_region (GenBank Accession Number JN157835)
AGAGCCAACAGCCCCACCAGAAGAGAGCTTCagGTTTGGGGAGGAGAtAACAACACCCTCTCAGAAACAGGAGGAGCTATATCCTTTGACCTCCCTCAAATCACTCTTTGGC
AGCGACCCCTCGTCACAGTAAAAATAGGAGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAGTGAATTTACCAGGAAGATGGAAACC
AAAAATGATAAGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGGTACCCATAGAAATCTGTGGACATAAAACTATAGGTACAGTATTAATAGGACCTACACCT
GTCAACATAATTGGAAGAAATCTATTGACTCAGATTGGCTGTACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTRAAATTAAAGCCAGGAATGGATGGCCCAA
AAGTTAAACAATGGCCATTGACAGAAGAAAAGATAAAAGCATTAGTAGAAATTTGCACAGAAATGGAAAAAGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAA
TACTCCAATATTTGCCATAAAGAAAAAAGACAGTACCAAATGGAGAAAATTAGTAGATTTTAGAGAACTTAACAAGAGAACTCAAGACTTCTGGGAGGTTCAGTTAGGAATA
CCACATCCCTCAGGGCTAAAAAAGAAAAAGTCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATCCAGACTTCAGGAAGTATACGGCATTCACCA
TACCTAGTAGAAACAATGAGACACCAGGGGTTAGATATCAGTACAATGTGCTTCCACAAGGATGGAAAGGATCACCAGCGATATTCCAAAGTAGCATGACAAAAATCTTAGA
GCCTTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGATTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAACAAAAATAGATGAACTGAGA
GAACATTTGTTGAGGTGGGGATTTGCCACACCAGACAAAAAACACCAGAAAGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTA
TAGTGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACATACAAAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATGCAGGGaTCAAAGTAaGGCAATTATGTAA
GCTcCTTaGGGGATCCAAaGCACTAACAGAAATAGTACCACTAaCAGAagAagCAGAGCTAGAaCTGGCAGAAAACAGAGAGATTCTAAAAGAACCAGTACATGGGGTGTAT
TATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAGCAGGGGTACGGCCAATGGACATACCAAATTTATCAAGAACCATTTAAGAATCTGAAAACAGGAAAATATGCAA
GAATAAGGGGTACCCACACTAATGATGTAAAACAATTAACAGAGACAGTGCAAAAAATAGCCCTAGAAAGCATAGTAATATGGGGAAAAACTCCTAAATTTAAATTACCCAT
ACAAAAAGAAACATGGGAAACATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAATGGGAGTTTGTCAATACCCCTCCCTTGGTGAAATTATGGTACCAGTTAGAG
AAAGATCCCATAGTGGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAACAGGGAGACTAAATTAGGAAAAGCAGGATATGTTACTAACAGAGGAAGACAAAAGGTTGTCT
CCCTAACTGACACAACAAATCAGAAGACTGAGTTACAAGCAATTTATCTAGCCTTGCAGGATTCAGGATTAGAAGTAAATATAGTGACAGACTCACAATATGCATTAGGAAT
CATTCAAGCACAACCAGATAAAAGTGAATCAGAGATAGTCAATCAAATAATAGAGCAGTTAATAAAAAAGGACAAGGTCTACCTGGCATGGGTACCAGCACACAAAGGAATC
GGAGGAAATGAACAAGTAGATAAATTAGTCAGTACTggaaTCAGGAAGgTGCTATTTTTAGATGGAATAgATAAGGCCCAaGAagACCATGAGAAGTATCACAGTAATTGGA
GAGCAATGGCTAGTGAATTTAACATACCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATGCATGGACAAGTAGATTGTAG
TCCAGGAATATGGCAGCTAGATTGTACACATTTAGAAGGAAAAATTATCCTGGTAGCAGTCCATGTAGCTAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGG
CAAGAAACAGCATACCTTATCTTGAAGCTAGCAGGAAGATGGCCAGTAAAAACAATACACACAGACAATGGCCCCAATTTCACCAGTAATACTGTTAAGGCCGCTTGTTGGT
GGGCAGGGATCCAGCAGGAATTCGGCATCCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTTTAAATAAAGAATTAAAGAAAATTATAGGACAAGTAAGAGATCAGGC
TGAACATCTTAAGACAGCAGTACAGATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACA
GACATACAAACTAGAGAATTACAAAAACAAATTTCAAAAATTCAAAATTTTCGGGTTTATTACAGAGACAGCAGAGATCCACTTTGGAAAGGACCAGCCAAACTCCTCTGGA
AAGGTGAAGGGGCAGTAGTAATATAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGgATTATGGAAAACAGATGGCAGGTGATGATTGtGT
GGCAAGTAGACAGGATGAGGATTAGAACATGGAACAGCCTAG
>MX-HIV-0395_complete_pol_region (GenBank Accession Number JN157836)
CCAGAGCCAACAGCCCCACCAGAGGAGAGTGTCAaATTTGGGGAGGAGACAACAATTCCTTCTCAGAAGCAGGGGACAATGGACAAGGAGGGGTATCCTCCTTTAGCTTCCC
TCAGATCACTCTTTGGCAACGACCCATTGTCACAATAAAGACAGGGGGGCAACTAAAGGAAGCTCTACTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAATTTG
CCAGGGAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAGGTAAGACAGTATGAAGAAGTATCCGTAGACATCTGCGGGCATAAAGCTATAGGTACAGTAT
TGGTAGGGCCTACACCTGTCAACATAATTGGAAGAAATCTGTTRACTCAGMTTGGTTGCACYTTAAATTTTCCCATTAGYCCTATTGAAACTGTACCAGTAAAAYTAAAGCC
AGGARTGGATGGCCCAAAAGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTTGTACAGAAATGGAAAAGGAAGGAAAAATTTCAAAAATTGGG
CCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAACTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGG
AAGTTCAATTAGGAATACCACACCCAGCAGGGTTAAAAAAGAACAGATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATAAAGACTTCAGGAA
GTATACTGCATTCACCATACCTAGTACAAACAATGAGACACCAGGAATTAGGTATCAGTACAATGTACTTCCACAAGGATGGAAAGGATCACCAGCAATATTCCAAAGTAGC
ATGACAAAGATCTTAGAGCCTTTTAGAAAAGAAAATCCAGACATAGTTATCTATCAATACATGGATGAtTTGTATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAACAA
AAATAGAGGAACTAAGACAACATCTGTTGAGGTGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTTCTTTGGATGGGTTATGAACTCCACCCCGATAA
ATGGaCAGTACAGCCTATAATGCTGCCAGAAAAGGACGGCTGGaCTGTCAATGACATACAGAAGTTAGTGGGAAAACTGAATTGGGCAAGTCAGATTTATTCaGGGaTTAAA
GTAAAGCAATTATGTAAACTCCTTcGGGGAGCCaAAGCaCTAACAGAAGTAGTACCACTAACAGCAGAAGCAGAGTTAGAACTGGCAGAAAACAGGGAGATTCTAAAGAACC
CAGTACATGGGGTGTACTATGACCCATCAAAAGACTTGATAGCAGAAGTACAGAAGCAGGGGCAAGATCAATGGACATATCAAATTTATCAAGAGCCATTTAAAAATCTGAA
AACAGGAAAGTATGCAAAAATGAGGGGTACCCACACTAATGATGCAAAACAATTAACAGAGGCAGTGCAAAAAATAGCCACAGAAAGCATAGTAATATGGGGAAAGACTCCT
AAATTTAAATTACCCATACAAAAGGAAACATGGGAAGCATGGTGGACAGAGTATTGGCAAGCCACCTGGATTCCTGAGTGGGAGTTTGTCAATACCCCACCCTTAGTGAAAT
TATGGTACCAGTTAGAAAAAGAACCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGGGCAGCTAACAGGGAGACTAAATTAGGAAAAGCAGGATATGTTACTGACAAAGG
AAGACAAGAGGTTGTTTCTCTAACTGACACAACCAATCAGAAGACTGAGTTACAAGCAATTTATCTAGCTTTGCAGGATTCGGGATCAGAAGTAAACATAGTAACAGACTCA
CGATATGCATTAGGAATCATTCATGCACAACCAGATAAGAGTGATTCAGATTTAGTCAGTCAAATAATAGAGCAGTTAATAAAAAAGGAAAAGATCTACCTAGCATGGGTTC
CAGCACACAAAGGAATTGGagGAAATGAACAAGTAGATAAATTAGTCAGTTCCGGAATCAGgAaAGTTCTATTtTTGGATGGaATAGAtaAggCCCAAGAAGACCATGAAAA
ATATCACAGTAATTGGAGGGCAATGGCCAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAACCTGCTGTGATAAATGTCAGCAAAAAGGAGAAGCCATGCAT
GGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATCTAGAAGGAAAAATTATCCTGGTAGCGGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTA
TTCCAGCAGAGACAGGACAGGAAACAGCATACTTCATCTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGGCAGCAATTTCACCAGTACTGCAGT
TAAGGCCGCCTGTTGGTGGGCGGGGATCAAGCAGGAATTTGGCATTCCCTACAACCCCCAAAGTCAAGGAGTAGTGGAGTCCATGAATAAAGAATTAAAGAAAATTATAGGA
CAGGTAAGAGATCAGGCTGAACACCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAG
TAGACATAATAGCATCAGACATACAAACTAAAGCATTACAAAAACACATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGGCC
AGCAAAACTTCTCTGGAAAGGTGAAGGGGCAGTAGTGATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAGGCAAAGATCATTAGGGATTATGGAAAACAGATG
GCAGGTGATGATTGTGTGGCAGGTAGACAGGATGAGGATTAGAACATGGA
>MX-HIV-0401_complete_pol_region (GenBank Accession Number JN157837)
GAGCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAAGAGACAACAACAACTcCCTCTCAGAAACAGGAGGGGTCAGACAAGGAACTGTATCCTTTTTCTTCCCTCA
AATCACTCTTTGGCAACGACCACTCGTCACAATAAAGATAGGGGGACAACTAAAGGAAGCTCTATTAGATACAGGGGCAGATGATACAGTATTAGAAGAAATGAATTTGTTA
GGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAGGTAAGACAGTATGATCAGGTACCCATAGAAATCTGTGGACATAAAGCTGTAGGTACAGTATTAG
TAGGACCTACACCTGTCAACACAATTGGAAGAAATCTRTTGACTCAGATTGGWTGYACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTAAAATTAAARCCAGG
AATGGATGGCCCAAAAGTKAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAGTAGAAATTCGCACAGAAATGGAAAAAGAAGGAAAAATTTCAGGAATTGGGCCT
GAAAATCCATATAATACTCCAATATTTGCCATAAAGAAAAAAGACAGTACTAAATGGAGAAAATTAGTAGATTTCAGAGAACTTAATAAGAGAACTCAAGACTTCTGGGAAG
TTCAATTAGGAATACCACATCCTGCAGGGCTAAAAAAGAAAAAATCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTCCCCTTAGATGAAGACTTCAGAAAGTA
TACTGCTTTTACCATACCTAGTACAAACAATGAGACACCAGGGATCAGATATCAGTACAATGTGCTTCCACAAGGATGGAAAGGATCACCAGCAATTTTCCAAAGCAGCATG
ACAAAAATCTTAGAACCTTTTGGGAAACGATATCCAGATATAGTTATCTATCAATACATGGATGATTTATATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAGAAAAAA
TAGAGGAACTGAGACAACATCTGTTAAAGTGGGGGTTTACCACACCAGACAAAAAACATCAGAaaGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATG
GACAGTACAGCCTATAGTGCTGCCAGAAAAAGACAGCTGGACAGTCAATGACaTACAGAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAgATTTATGCaGGGATTAAAGTA
AGGCAATTATGTAAACTCCTTAGAGGAGCTAAAGCACTAACAGAAGTAGTACCACTAACAAAAGAAGCAGAACTAGAACTGGCAGAAAACAGGGARATTCTAAAACAgCCAG
TACATGGGGtgTATTATGACCCATCAAAAGATTTAATAGCAGAAATACAGAAGCAGGGACAGGGCCAATGGACATATCAAATTTATCAGGAACCATTTAAAAATCTGAAAAC
AGGAAAATATGCAAAAATGAGGAGTGCCCACACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAACAGCCACAGAAAGCATAGTAATATGAGGAAAGACTCCTAAG
TTTAGATTACCCATACAAAAGGAAGCATGGGAAGCATGGTGGTCAGAGTATTGGCAAGCCACCTGGATCCCTGAGTGGGAGTTTGTCAATACTCCTCCCTTAGTAAAATTAT
GGTATCAATTAGAGACAGAACCCATAGTAGGAGCAGAAACTTTCTATGTGGATGGGGCAGCTAATAGGGAAACTAAATCAGGTAAAGCAGGATATGTTACTGACAGAGGAAG
ACAAAAGGTAGTCCCCCTAGCGGACACAACAAATCAGAAGACTGAGTTACAAGCAATTCATCTAGCTTTGCAGGATTCAGGATCAGAAGTAAATATAGTAACAGACTCCCAA
TATGCATTAGGAATTATTCAAGCGCAACCAGATAAGAGTGAATCAGAAATAGTCAGTCAAATAATAGAACAGTTAATAAAAAAGGAAAAGGTCTACCTGGCATGGGTACCAG
CACACAAAGGAATTGGAGGTAATGAACAGGTAGACAAATTAGTCAGTAAWGGAATYAGAAAAGTRCTATTYTTRGATGGAATAGATAAGGCCCAAGAAGAcCATGAAAAATA
TCACACTAATTGGAGGGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAATGTCAGCTAAAAGGGGAAGCCATACATGGA
CAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAGGAAAAATTATTCTGGTAGCAGTACATGTAGCCAGTGGATATATAGAAGCAGAAGTCATTC
CAGCAGAGACAGGACAGGAAACAGCATACTTCCTCTTAAAATTAGCAGGAAGATGGCCAGTAAAAATGATACATACAGACAATGGCCCCAATTTCATCAGTAATGCGGTTAA
GGCCGCCTGTTGGTGGGCAGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAG
GTAAGAGATCAAGCTGAACATCTTAAGACAGCAGTACAGATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGATACAGTGCAGGGGAAAGAATAATAG
ACATAATAGCAACAGACATACAAAGTAAAGAACTACAAAAACAAATTACAAAACTTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGACCCACTTTGGAAAGGACCAGC
AAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCA
GGTGATGATTGTGTGGCAAGTAGACAGGATGAGGATTAGAACATGG
>MX-HIV-0422_complete_pol_region (GenBank Accession Number JN157838)
GCCAACAGCCCCACCAGAAGAGAGCTTCAGGTTTGGGGAGGAGATAACAACACcctctCAGAAACAGGAGGAGCTATATCCTTTGACCTCCCTCAAATCACTCTTTGGCAGC
GACCCCTCGTCACAGTAAAAATAGGAGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGAAATGAATTTACCAGGAAGATGGTAACCAAA
AATGATAAGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGGTACCCATAGAAATCTGTGGACATAAAACTATAGGTACAGTATTAATAGGACCTACACCTGTC
AACATAATTGGAAGAAATCTRTTGACTCAGATTGGMTGYACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGTRAAATTAAARCCAGGAATGGATGGCCCAAAAG
TTAAACAATGGCCATTGACAGAAGAAAAGATAAAAGCATTAGTAGAAATTTGCACAGAAATGGAAAAAGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAATAC
TCCAATATTTGCCATAAAGAAAAAAGACAGTACCAAATGGAGAAAATTAGTAGATTTTAGAGAACTTAACAAGAGAACTCAAGACTTCTGGGAGGTTCAGTTAGGAATACCA
CATCCCTCAGGGCTAAAAAAGAAAAAGTCAGTAACAGTACTGGATGTGGGTGATGCATATTTTTCAGTTCCCTTAGATCCAGACTTCAGGAAGTATACGGCATTCACCATAC
CTAGTAGAAACAATGAGACACCAGGGGTTAGATATCAGTACAATGTGCTTCCACAAGGATGGAAAGGATCACCAGCGATATTCCAAAGTAGCATGACAAAAATCTTAGAGCC
TTTTAGAAAACAAAATCCAGACATAGTTATCTATCAATACATGGATGAtTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAACAAAAATAGATGAACTGAGAGAA
CATTTGTTGAGGTGGGGATTTGCCACACCAGACAAAAAACACCAGAaaGAACCTCCATTCCTTTGGATGGGTTATGAACTCCATCCTGATAAATGGACAGTACAGCCTATAG
TGCTGCCAGAAAAAGACAGCTGGACTGTCAATGACaTACAAAAGTTAGTGGGAAAATTAAATTGGGCAAGTCAGATTTATGCaGGGATCAAAGTAAGGCAATTaTGTAARCT
cCtTAgRGGAKCYaAAGCACTAACAgaARTAGTACCACTAACARAAGAAGCAGARCTAGAACTGGCAGAAAACAGRGAGATtCTAAAAGAACCAGTACATGGGGTGTATTAT
GACCCATCAAAAGACTTAATAGCAGAAATACAGAAACAGGAGCTAGGCCAATGGACATATCAAATTTATCAAGAGCCACTTAAGAATCTGAAAACAGGAAAATATGCAAGAA
TGAGGGGTGCCCACACTAATGATGTAAAACAGTTAACAGAGGCAGTGCAAAAAATAGCCACAGAAAGCATAGTGATATGGGGAAAGACTCCTAAATTTAGACTACCCATACA
AAAGGAAACATGGGAAGCATGGTGGATGGAGTATTGGCAAGCCACTTGGATTCCTGAATGGGAATTTGTCAATACCCCTCCCTTAGTGAAATTATGGTACCAGTTAGAGAAA
GACCCCATAGTAGGAGCAGAAACTTTCTATGTAGATGGAGCAGCTAATAGGGACACTAAACTAGGAAAAGCAGGGTATGTTACTGACAGAGGAAGACAAAAAGTAGTCTCCC
TGACTGACACAACAAGTCAGAAGACTGAGTTACAGGCAATTAATCTAGCTTTACAGGATTCAGGGCCAGAAGTAAACATAGTAACAGACTCACAATATGCATTAGGAATAAT
TCAAGCGCAACCAGATAAGAGTGAATCAGAGGTAGTCAGTCAAATAATAGAACAATTAATAAAAAAGGAAAAAGTCTACCTGACATGGgTACCAGCACACAAAGGaaTTGGa
GGAAATGAAAGAGTAGATAAGTTAGTCAGTGCTGGaATCAGAAAAGTACTATTTTTRGATGGAATAGATaAAGCCcAAGAAGAACATGAGAAGTATCACAGTAATTGGAGAG
CAATGGCTAGTGATTTTAACCTACCACCTGTAGTAGCAAAAGAAATAGTAGCCAGCTGTGATAAGTGTCAGTTAAAAGGAGAAGCCATGCATGGACAAGTAGACTGTAGCCC
AGGAATATGGCAGCTAGATTGTACACACTTAGAAGGAAAAATTATTCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAGACAGGGCAA
GAAACAGCATACTTTATTTTAAAACTAGCCGGGAGATGGCCAGTAAAAACAATACATACAGACAATGGCAGCAATTTTACCAGTACTACAGTTAAGGCCGCCTGTTGGTGGG
CGGGGATCAAACAGGAATTTGGTATTCCCTACAATCCTCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATAATAGAACAGGTAAGAGATCAGGCTGA
ACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGAC
ATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTTAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTTCTTTGGaAAG
GTGAAGGGGCAGTAGTGATACAAGATAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGACTATGGAAAACAGATGGCAGGTGATGATTGTGTgGC
AAGTAGACAGGATGAGGATTAGGACATG
PG Hernández-Sánchez, CA García-Sepúlveda
Laboratorio de Genómica Viral y Humana
Facultad de Medicina – UASLP
San Luis Potosí, México
2011